cameo
Installation
Setting up a virtual environment first
Non-python dependencies
GLPK
CPLEX
Normal installation
Development setup
Quickstart
High-level interface for users
IPython notebook
Low-level interface for developers
cameo vs. cobrapy
Importing a model
Solving models
Solution object
Formulating and solving optimization problems
Importing models
SBML
Models available on the web
Strain-design
Predicting heterologous pathways
Deterministic methods
Heuristic methods
Avoid copies at all costs
IPython notebook
Parallelization
cameo vs. cobrapy
Importing a model
Solving models
How to ...
API
cameo package
Subpackages
cameo.api package
cameo.core package
cameo.flux_analysis package
cameo.strain_design package
Submodules
cameo.config module
cameo.exceptions module
cameo.io module
cameo.parallel module
cameo.stuff module
cameo.util module
cameo.visualization module
cameo.webmodels module
Module contents
cameo
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cameo package
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cameo.strain_design package
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cameo.strain_design.pathway_prediction package
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cameo.strain_design.pathway_prediction package
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Module contents
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v: 0.3.1
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