from cameo import webmodels
models = webmodels.index_models()
models
| id | name | doi | author | year | formats | organism | taxonomy | |
|---|---|---|---|---|---|---|---|---|
| 0 | 1 | iJR904 | 10.1186/gb-2003-4-9-r54 | Reed | 2003 | [sbml] | Escherichia coli str. K12 substr. MG1655 | Bacteria; Proteobacteria; Gammaproteobacteria;... |
| 1 | 2 | iAF1260 | 10.1038/msb4100155 | Feist | 2007 | [sbml] | Escherichia coli str. K12 substr. MG1655 | Bacteria; Proteobacteria; Gammaproteobacteria;... |
| 2 | 3 | iMM904 | 10.1186/1752-0509-3-37 | Mo | 2007 | [sbml] | Saccharomyces cerevisiae | Eukaryota; Opisthokonta; Fungi; Dikarya; Ascom... |
| 3 | 4 | iJP815 | 10.1371/journal.pcbi.1000210 | Puchalka | 2008 | [sbml] | Pseudomonas putida str. KT2440 | Bacteria; Proteobacteria; Gammaproteobacteria;... |
| 4 | 5 | iMO1056 | 10.1128/JB.01583-07 | Oberhardt | 2008 | [] | Pseudomonas aeruginosa str. PAO1 | Bacteria; Proteobacteria; Gammaproteobacteria;... |
| 5 | 6 | iIN800 | 10.1186/1752-0509-2-71 | Nookaew | 2008 | [sbml] | Saccharomyces cerevisiae | Eukaryota; Opisthokonta; Fungi; Dikarya; Ascom... |
| 6 | 7 | iFF708 | 10.1101/gr.234503 | Förster | 2003 | [sbml] | Saccharomyces cerevisiae str. Sc288 | Eukaryota; Opisthokonta; Fungi; Dikarya; Ascom... |
| 7 | 8 | iCA1273 | 10.1186/1471-2164-12-9 | Archer | 2011 | [sbml] | Escherichia coli W | Bacteria; Proteobacteria; Gammaproteobacteria;... |
| 8 | 9 | iJO1366 | 10.1038/msb.2011.65 | Orth | 2011 | [sbml] | Escherichia coli str. K12 substr. MG1655 | Bacteria; Proteobacteria; Gammaproteobacteria;... |
| 9 | 10 | Consensus v4 | 10.1038/nbt1492 | Herrgård | 2008 | [] | Yeast | Eukaryota; Opisthokonta; Fungi; |
| 10 | 11 | iJN746 | 10.1186/1752-0509-2-79 | Nogales | 2008 | [sbml] | Pseudomonas putida str. KT2440 | Bacteria; Proteobacteria; Gammaproteobacteria;... |
| 11 | 12 | AbyMBEL891 | 10.1039/B916446D | Kim | 2010 | [sbml] | Acinetobacter baumannii AYE | Bacteria; Proteobacteria; Gammaproteobacteria;... |
| 12 | 13 | iJP962 | 10.1371/journal.pcbi.1001116 | Oberhardt | 2011 | [sbml] | Pseudomonas putida str. KT2440 | Bacteria; Proteobacteria; Gammaproteobacteria;... |
| 13 | 14 | iYL1228 | 10.1128/JB.01218-10 | Liao | 2011 | [sbml] | Klebsiella pneumoniae str. MGH 78578 | Bacteria; Proteobacteria; Gammaproteobacteria;... |
| 14 | 15 | iSR432 | 10.1186/1752-0509-4-31 | Roberts | 2010 | [sbml] | Clostridium thermocellum str. ATCC 27405 | Bacteria; Firmicutes; Clostridia; Clostridial... |
| 15 | 16 | iNJ661m | 10.1186/1752-0509-4-160 | Fang | 2010 | [sbml] | Mycobacterium tuberculosis str. H37Rv | Bacteria; Actinobacteria; Actinobacteria; Acti... |
| 16 | 17 | iCM925 | 10.1186/1752-0509-5-130 | Milne | 2011 | [sbml] | Clostridium beijerinckii str. NCIMB 8052 | Bacteria; Firmicutes; Clostridia; Clostridiale... |
| 17 | 18 | iBsu1103 | 10.1186/gb-2009-10-6-r69 | Henry | 2009 | [sbml] | Bacillus subtilis 168 | Bacteria; Firmicutes; Bacilli; Bacillales; Bac... |
| 18 | 19 | iAI549 | 10.1371/journal.pcbi.1000887 | Islam | 2010 | [sbml] | Dehalococcoides ethenogenes str. 2061 | Bacteria; Chloroflexi; Dehalococcoidetes; Deha... |
| 19 | 20 | iAF692 | 10.1038/msb4100046 | Feist | 2006 | [sbml] | Methanosarcina barkeri | Archaea; Euryarchaeota; Methanomicrobia; Metha... |
| 20 | 21 | AraGEM | 10.1186/1471-2164-12-S4-S5 | de Oliveira Dal'Molin | 2010 | [sbml] | Arabidopsis thaliana | Eukaryota; Viridiplantae; Streptophyta; Strept... |
| 21 | 22 | Ecoli core Model | 10.1128/ecosal.10.2.1 | Orth | 2010 | [sbml] | Escherichia coli str. K12 substr. MG1655 | Bacteria; Proteobacteria; Gammaproteobacteria;... |
| 22 | 23 | iIT341 | 10.1128/JB.187.16.5818-5830.2005 | Thiele | 2005 | [sbml] | Helicobacter pylori str. 26695 | Bacteria; Proteobacteria; delta/epsilon subdi... |
| 23 | 24 | iMH805/775 | 10.1038/nbt1492 | Herrgård | 2008 | [sbml] | Saccharomyces cerevisiae str. Sc288 | Eukaryota; Opisthokonta; Fungi; Dikarya; Ascom... |
| 24 | 25 | iND750 | 10.1101/gr.2250904 | Duarte | 2004 | [sbml] | Saccharomyces cerevisiae str. Sc288 | Eukaryota; Opisthokonta; Fungi; Dikarya; Ascom... |
| 25 | 26 | iRC1080 | 10.1038/msb.2011.52 | Chang | 2011 | [sbml] | Chlamydomonas reinhardtii | Eukaryota; Viridiplantae; Chlorophyta; Chlorop... |
| 26 | 27 | iSB619 | 10.1186/1471-2180-5-8 | Becker | 2005 | [sbml] | Staphylococcus aureus | Bacteria; Firmicutes; Bacilli; Bacillales; St... |
| 27 | 28 | iTH366 | 10.1038/msb.2010.60 | Plata | 2010 | [sbml] | Plasmodium falciparum | Eukaryota; Alveolata; Apicomplexa; Aconoidasid... |
| 28 | 29 | iTZ479 | 10.1126/science.1174671 | Zhang | 2009 | [sbml] | Thermotoga maritima str. MSB8 | Bacteria; Thermotogae; Thermotogae; Thermotoga... |
| 29 | 30 | recon2 | 10.1038/nbt.2488 | Thiele | 2013 | [sbml] | Homo sapiens | Eukaryota; Opisthokonta; Metazoa; Eumetazoa; B... |
| ... | ... | ... | ... | ... | ... | ... | ... | ... |
| 114 | 115 | iAK692 | 10.1186/1752-0509-6-71 | Klanchui | 2012 | [sbml] | Spirulina platensis C1 | Bacteria; Cyanobacteria; Oscillatoriophycideae... |
| 115 | 116 | iSS352 | 10.1016/j.jbiotec.2013.01.023 | Schatschneider | 2013 | [sbml] | Xanthomonas campestris pv. campestris str. B100 | Bacteria; Proteobacteria; Gammaproteobacteria;... |
| 116 | 117 | iSS352 | 10.1016/j.jbiotec.2013.01.023 | Schatschneider | 2013 | [sbml] | Xanthomonas campestris pv. campestris str. B100 | Bacteria; Proteobacteria; Gammaproteobacteria;... |
| 117 | 118 | iOD907 | Oscar Dias | 2013 | [sbml] | Kluyveromyces lactis NRRL Y-1140 | Eukaryota; Opisthokonta; Fungi; Dikarya; Ascom... | |
| 118 | 119 | iCAC490 | 10.1186/1752-0509-6-42 | McAnulty | 2012 | [sbml] | Clostridium acetobutylicum ATCC 824 | Bacteria; Firmicutes; Clostridia; Clostridiale... |
| 119 | 120 | iTZ479_v2 | 10.1016/j.ijhydene.2012.06.032 | Nogales | 2012 | [] | Thermotoga maritima | Bacteria; Thermotogae; Thermotogae; Thermotoga... |
| 120 | 121 | iAH991 | 10.4161/gmic.22370 | Heinken | 2012 | [] | Bacteroides thetaiotaomicron | Bacteria; Bacteroidetes/Chlorobi group; Bacter... |
| 121 | 122 | SPNV1.0 | 10.1186/1475-2859-13-41 | Wang | 2014 | [excel] | Saccharopolyspora spinosa NRRL 18395 | Bacteria; Actinobacteria; Actinobacteria; Acti... |
| 122 | 123 | iCyc792 | 10.1186/1752-0509-7-142 | Mueller | 2013 | [sbml, excel] | Cyanothece sp. PCC 7424 | Bacteria; Cyanobacteria; Oscillatoriophycideae... |
| 123 | 124 | iCyn731 | 10.1186/1752-0509-7-142 | Mueller | 2013 | [sbml, excel] | Cyanothece sp. PCC 7425 | Bacteria; Cyanobacteria; Oscillatoriophycideae... |
| 124 | 125 | iCyj826 | 10.1186/1752-0509-7-142 | Mueller | 2013 | [sbml, excel] | Cyanothece sp. PCC 7822 | Bacteria; Cyanobacteria; Oscillatoriophycideae... |
| 125 | 126 | iCyp752 | 10.1186/1752-0509-7-142 | Mueller | 2013 | [sbml, excel] | Cyanothece sp. PCC 8801 | Bacteria; Cyanobacteria; Oscillatoriophycideae... |
| 126 | 127 | iCyh755 | 10.1186/1752-0509-7-142 | Mueller | 2013 | [sbml, excel] | Cyanothece sp. PCC 8802 | Bacteria; Cyanobacteria; Oscillatoriophycideae... |
| 127 | 128 | iNF518 | 10.1007/s00253-013-5140-2 | Flahaut | 2013 | [sbml] | Lactococcus lactis subsp. cremoris MG1363 | Bacteria; Firmicutes; Bacilli; Lactobacillales... |
| 128 | 129 | iJL1454 | 10.1039/C3MB70090A | Jie Liu | 2013 | [excel] | Aspergillus terreus NIH2624 | Eukaryota; Opisthokonta; Fungi; Dikarya; Ascom... |
| 129 | 130 | iBif452 | 10.1186/1752-0509-8-41 | El-Semman | 2014 | [sbml, excel] | Bifidobacterium adolescentis L2-32 | Bacteria; Actinobacteria; Actinobacteria; Acti... |
| 130 | 131 | iFap484 | 10.1186/1752-0509-8-41 | El-Semman | 2014 | [sbml, excel] | Faecalibacterium prausnitzii A2-165 | Bacteria; Firmicutes; Clostridia; Clostridiale... |
| 131 | 132 | iAM388 | 10.1186/1471-2164-12-535 | Aline Metris | 2011 | [excel] | Campylobacter jejuni subsp. jejuni NCTC 11168 | Bacteria; Proteobacteria; delta/epsilon subdiv... |
| 132 | 133 | iTT548 | 10.1186/1475-2859-13-61 | Na-Rae Lee | 2014 | [sbml, excel] | Thermus thermophilus | Bacteria; Deinococcus-Thermus; Deinococci; The... |
| 133 | 134 | EctoGEM-1.0 | 10.1111/tpj.12627 | Prigent | 2014 | [sbml] | Ectocarpus siliculosus | Eukaryota; Stramenopiles; PX clade; Phaeophyce... |
| 134 | 135 | iMF721 | 10.1111/1462-2920.12513 | Fondi | 2014 | [sbml] | Pseudoalteromonas haloplanktis TAC125 | Bacteria; Proteobacteria; Gammaproteobacteria;... |
| 135 | 136 | Arabidopsis core model | 10.1104/pp.114.235358 | Arnold | 2014 | [sbml] | Arabidopsis thaliana | Eukaryota; Viridiplantae; Streptophyta; Strept... |
| 136 | 137 | iHN637 | 10.1186/1475-2859-12-118 | Harish Nagarajan | 2013 | [] | Clostridium ljungdahlii | Bacteria; Firmicutes; Clostridia; Clostridiale... |
| 137 | 138 | iCac802 | 10.1186/s13068-014-0144-4 | Satyakam Dash | 2014 | [sbml] | Clostridium acetobutylicum ATCC 824 | Bacteria; Firmicutes; Clostridia; Clostridiale... |
| 138 | 139 | iMLTC806cdf | 10.1186/s12918-014-0117-z | M. Larocque | 2014 | [sbml, excel] | Clostridium difficile 630 | Bacteria; Firmicutes; Clostridia; Clostridiale... |
| 139 | 140 | iCY1106 | 10.1186/s12918-014-0137-8 | Chao Ye | 2015 | [sbml] | Mortierella alpina | Eukaryota; Opisthokonta; Fungi; Fungi incertae... |
| 140 | 141 | iMM518 | 10.1039/c3mb70421a | N. Goyal | 2014 | [excel] | Methanococcus maripaludis S2 | Archaea; Euryarchaeota; Methanococci; Methanoc... |
| 141 | 142 | iPC1209 | 10.1016/j.febslet.2014.12.010 | Cheng Wang | 2015 | [] | Pectobacterium carotovorum subsp. carotovorum PC1 | Bacteria; Proteobacteria; Gammaproteobacteria;... |
| 142 | 143 | iNV706 | 10.1128/AEM.03279-14 | N. Veith | 2014 | [] | Enterococcus faecalis V583 | Bacteria; Firmicutes; Bacilli; Lactobacillales... |
| 143 | 144 | KoxGSC1457 | 10.1186/1475-2859-12-20 | J. Park | 2013 | [] | Klebsiella oxytoca | Bacteria; Proteobacteria; Gammaproteobacteria;... |
144 rows × 8 columns